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C

call(Http.Request) - Method in class auth.gui.AuthAction
 
call(Http.Context) - Method in class controllers.gui.actionannotations.ApiAccessLoggingAction
 
call(Http.Context) - Method in class controllers.gui.actionannotations.GuiAccessLoggingAction
 
call(Http.Context) - Method in class controllers.publix.actionannotation.PublixAccessLoggingAction
 
callback(Http.Request) - Method in class auth.gui.SignInOidc
Callback handed to the OIDC provider to be called after authentication
cancelUpdate() - Method in class controllers.gui.Updates
 
cancelUpdate() - Method in class general.common.JatosUpdater
 
changeActive(Component, boolean) - Method in class daos.common.ComponentDao
Change and persist active property of a Component.
changeAdminRole(String, Boolean) - Method in class services.gui.UserService
Adds or removes ADMIN role of the user with the given username and persists the change.
changeComponentOrder(Long, Long, String) - Method in class controllers.gui.Studies
POST request to change the oder of components within a study.
changeComponentPosition(String, Study, Component) - Method in class services.gui.StudyService
Changes the position of the given component within the given study to the new position given in newPosition.
changePasswordByAdmin(Http.Request) - Method in class controllers.gui.Users
Handles POST request from change password form in user manager initiated by an admin
changePasswordByUser(Http.Request) - Method in class controllers.gui.Users
Handles POST request from change password form by user themselves
ChangePasswordModel - Class in models.gui
Model used by the GUI to change a user password.
ChangePasswordModel() - Constructor for class models.gui.ChangePasswordModel
 
changeSuperuserRole(String, boolean) - Method in class services.gui.UserService
Adds or removes SUPERUSER role of the user with the given username and persists the change.
changeUserMember(Study, User, boolean) - Method in class services.gui.StudyService
Changes the member user in the study.
ChangeUserProfileModel - Class in models.gui
Model used by the GUI to change a user's profile.
ChangeUserProfileModel() - Constructor for class models.gui.ChangeUserProfileModel
 
checkComponentBelongsToStudy(Study, Component) - Method in class services.publix.PublixUtils
Checks if this component belongs to this study and throws an BadRequestPublixException if it doesn't.
checkComponentResult(T, User, boolean) - Method in class services.gui.Checker
Checks a ComponentResult whether the belonging Study and Component are fine (checkStandard).
checkComponentResults(List<ComponentResult>, User, boolean) - Method in class services.gui.Checker
Checks a list of ComponentResult.
checkDefaultBatch(Batch) - Method in class services.gui.Checker
Throws an ForbiddenException if this batch is the default batch of it's study.
Checker - Class in services.gui
Service class that provides checks for different entities
Checker() - Constructor for class services.gui.Checker
 
checkFileInStudyAssetsDirExists(String, String) - Method in class utils.common.IOUtils
 
checkFilename(String) - Static method in class utils.common.IOUtils
 
checkMaxTotalWorkers(Batch, Worker) - Method in class services.publix.StudyAuthorisation
Check if the max total worker number is reached for this batch.
checkStandardForBatch(Batch, Study, Long) - Method in class services.gui.Checker
Checks the batch and throws an Exception in case of a problem.
checkStandardForBatch(Batch, Long, User) - Method in class services.gui.Checker
 
checkStandardForComponent(Long, Long, Component) - Method in class services.gui.Checker
Checks the component of this study and throws an Exception in case of a problem.
checkStandardForComponent(Long, Component, User) - Method in class services.gui.Checker
 
checkStandardForGroup(GroupResult, Study, Long) - Method in class services.gui.Checker
Checks the group and throws an Exception in case of a problem.
checkStandardForGroup(GroupResult, Long, User) - Method in class services.gui.Checker
 
checkStandardForStudy(Study, Long, User) - Method in class services.gui.Checker
Checks the study and throws an Exception in case of a problem.
checkStudyAssetsDirExists(String) - Method in class utils.common.IOUtils
 
checkStudyIsGroupStudy(Study) - Method in class services.publix.PublixUtils
Throws ForbiddenPublixException if group doesn't allow messaging.
checkStudyLocked(Study) - Method in class services.gui.Checker
Throws an ForbiddenException if a study is locked.
checkStudyResult(StudyResult, User, boolean) - Method in class services.gui.Checker
Checks a StudyResult whether the belonging Study is fine, especially that the StudyResult belongs to this user.
checkStudyResults(List<StudyResult>, User, boolean) - Method in class services.gui.Checker
Checks a list of StudyResult.
checksum - Variable in class utils.common.DirectoryStructureToJson.Node
 
checkWorker(Worker, Long) - Method in class services.gui.Checker
Throws a Exception in case the worker doesn't exist.
checkWorkerAllowedToDoStudy(Http.Session, Worker, Study, Batch) - Method in class services.publix.StudyAuthorisation
Checks whether the given worker is allowed to do this study in this batch.
checkWorkerAllowedToDoStudy(Http.Session, Worker, Study, Batch) - Method in class services.publix.workers.GeneralMultipleStudyAuthorisation
 
checkWorkerAllowedToDoStudy(Http.Session, Worker, Study, Batch) - Method in class services.publix.workers.GeneralSingleStudyAuthorisation
 
checkWorkerAllowedToDoStudy(Http.Session, Worker, Study, Batch) - Method in class services.publix.workers.JatosStudyAuthorisation
 
checkWorkerAllowedToDoStudy(Http.Session, Worker, Study, Batch) - Method in class services.publix.workers.MTStudyAuthorisation
 
checkWorkerAllowedToDoStudy(Http.Session, Worker, Study, Batch) - Method in class services.publix.workers.PersonalMultipleStudyAuthorisation
 
checkWorkerAllowedToDoStudy(Http.Session, Worker, Study, Batch) - Method in class services.publix.workers.PersonalSingleStudyAuthorisation
 
checkWorkerAllowedToStartStudy(Http.Session, Worker, Study, Batch) - Method in class services.publix.StudyAuthorisation
Checks whether the given worker is allowed to start this study in this batch.
checkWorkerAllowedToStartStudy(Http.Session, Worker, Study, Batch) - Method in class services.publix.workers.GeneralMultipleStudyAuthorisation
 
checkWorkerAllowedToStartStudy(Http.Session, Worker, Study, Batch) - Method in class services.publix.workers.GeneralSingleStudyAuthorisation
 
checkWorkerAllowedToStartStudy(Http.Session, Worker, Study, Batch) - Method in class services.publix.workers.JatosStudyAuthorisation
 
checkWorkerAllowedToStartStudy(Http.Session, Worker, Study, Batch) - Method in class services.publix.workers.MTStudyAuthorisation
 
checkWorkerAllowedToStartStudy(Http.Session, Worker, Study, Batch) - Method in class services.publix.workers.PersonalMultipleStudyAuthorisation
 
checkWorkerAllowedToStartStudy(Http.Session, Worker, Study, Batch) - Method in class services.publix.workers.PersonalSingleStudyAuthorisation
 
cleanupAfterStudyImport() - Method in class services.gui.ImportExportService
 
clone(Batch) - Method in class services.gui.BatchService
Clones a Batch but does not persists.
clone(Component) - Method in class services.gui.ComponentService
Clones a Component entity.
clone(Study) - Method in class services.gui.StudyService
Clones the given Study.
cloneComponent(Long, Long) - Method in class controllers.gui.Components
GET request to clone a component.
cloneComponentHtmlFile(String, String) - Method in class utils.common.IOUtils
Copies a component's HTML file.
cloneStudy(Long) - Method in class controllers.gui.Studies
GET request to clones a study.
cloneStudyAssetsDirectory(String) - Method in class utils.common.IOUtils
Copies study assets' directory.
cloneWholeComponent(Component) - Method in class services.gui.ComponentService
Does the same as cloneComponent and additionally clones the HTML file and changes the title.
COMMENT - Static variable in class models.common.workers.PersonalMultipleWorker
 
COMMENT - Static variable in class models.common.workers.PersonalSingleWorker
 
COMMENT_TOO_LONG - Static variable in class general.common.MessagesStrings
 
COMMENTS - Static variable in class models.common.legacy.StudyV2
 
COMMENTS - Static variable in class models.gui.BatchProperties
 
COMMENTS - Static variable in class models.gui.ComponentProperties
 
COMMENTS - Static variable in class models.gui.StudyProperties
 
Common - Class in general.common
This class provides configuration properties that are common to all modules of JATOS.
CommonGuiceModule - Class in general.common
Configuration of Guice dependency injection for Publix module
CommonGuiceModule() - Constructor for class general.common.CommonGuiceModule
 
Component - Class in models.common
DB entity of a component.
Component() - Constructor for class models.common.Component
 
COMPONENT - Static variable in class models.common.Component
 
COMPONENT - Static variable in class models.gui.ComponentProperties
 
COMPONENT_DELETED_BUT_FILES_NOT - Static variable in class general.common.MessagesStrings
 
COMPONENT_ID - Static variable in class services.publix.idcookie.IdCookieModel
 
COMPONENT_INVALID - Static variable in class general.common.MessagesStrings
 
COMPONENT_POSITION - Static variable in class services.publix.idcookie.IdCookieModel
 
COMPONENT_RESULT_ID - Static variable in class services.publix.idcookie.IdCookieModel
 
COMPONENT_WASNT_SAVED - Static variable in class general.common.MessagesStrings
 
componentCloneHtmlNotCloned(String) - Static method in class general.common.MessagesStrings
 
ComponentDao - Class in daos.common
DAO for Component entity
componentDone(ComponentResult) - Static method in class services.publix.PublixHelpers
True if ComponentResult's state is in FINISHED or ABORTED or FAIL or RELOADED.
componentHasNoStudy(Long) - Static method in class general.common.MessagesStrings
 
componentNotActive(Long, Long) - Static method in class services.publix.PublixErrorMessages
 
componentNotAllowedToReload(Long, Long) - Static method in class services.publix.PublixErrorMessages
 
componentNotBelongToStudy(Long, Long) - Static method in class general.common.MessagesStrings
 
componentNotBelongToStudy(Long, Long) - Static method in class services.publix.PublixErrorMessages
 
componentNotExist(Long) - Static method in class general.common.MessagesStrings
 
componentNotExist(Long, Long) - Static method in class services.publix.PublixErrorMessages
 
ComponentProperties - Class in models.gui
Model of component properties for UI (not persisted in DB).
ComponentProperties() - Constructor for class models.gui.ComponentProperties
 
ComponentResult - Class in models.common
DB entity of a component result.
ComponentResult() - Constructor for class models.common.ComponentResult
 
ComponentResult(Component) - Constructor for class models.common.ComponentResult
 
ComponentResult.ComponentState - Enum in models.common
State of this component run (it actually should be called ComponentResultState)
componentResultAsJsonNode(ComponentResult) - Method in class utils.common.JsonUtils
Returns an ObjectNode of the given ComponentResult.
componentResultDao - Variable in class controllers.publix.Publix
 
ComponentResultDao - Class in daos.common
DAO for ComponentResult entity
componentResultDataShortForUI(ComponentResult) - Method in class utils.common.JsonUtils
Returns ComponentResult.dataShort limited to MAX_CHAR_PER_RESULT characters.
ComponentResultIdsExtractor - Class in services.gui
Extracts component result IDs from JSON or a Map.
componentResultMetadata(ComponentResult) - Method in class utils.common.JsonUtils
 
ComponentResultMigration - Class in migrations.common
Migrates the database for all <3.7.5.
componentResultNotExist(Long) - Static method in class general.common.MessagesStrings
 
ComponentResults - Class in controllers.gui
Controller that deals with requests regarding ComponentResult.
componentResults(Long, Long) - Method in class controllers.gui.ComponentResults
Shows a view with all component results of a component of a study.
Components - Class in controllers.gui
Controller that deals with all requests regarding Components within the JATOS GUI.
ComponentService - Class in services.gui
Service class for JATOS Controllers (not Publix).
ComponentUploadUnmarshaller - Class in services.gui
Unmarshalling of an JSON string to a componet.
concreteUnmarshaling(String) - Method in class services.gui.ComponentUploadUnmarshaller
Accepts an JSON String and turns the data object within this JSON String into an object of type Component.
concreteUnmarshaling(String) - Method in class services.gui.StudyUploadUnmarshaller
Accepts an JSON String and turns the data object within this JSON String into an object of type Study.
concreteUnmarshaling(String) - Method in class services.gui.UploadUnmarshaller
Accepts an JSON String and turns the data object within this JSON String into an object of the type T.
configure() - Method in class general.common.CommonGuiceModule
 
configure() - Method in class general.publix.PublixGuiceModule
 
content - Variable in class utils.common.DirectoryStructureToJson.Node
 
controllers.gui - package controllers.gui
 
controllers.gui.actionannotations - package controllers.gui.actionannotations
 
controllers.publix - package controllers.publix
 
controllers.publix.actionannotation - package controllers.publix.actionannotation
 
controllers.publix.workers - package controllers.publix.workers
 
COOKIE_AND - Static variable in class services.publix.idcookie.IdCookieSerialiser
 
COOKIE_EQUALS - Static variable in class services.publix.idcookie.IdCookieSerialiser
 
COOKIE_NAME - Static variable in class services.publix.workers.GeneralSingleCookieService
 
COULDNT_CHANGE_POSITION_OF_COMPONENT - Static variable in class general.common.MessagesStrings
 
COULDNT_OPEN_LOG - Static variable in class general.common.MessagesStrings
 
COULDNT_READ_FILE - Static variable in class general.common.MessagesStrings
 
COULDNT_READ_JSON - Static variable in class general.common.MessagesStrings
 
couldntExtractFromIdCookie(String, String) - Static method in class services.publix.PublixErrorMessages
 
couldntExtractIndexFromIdCookieName(String) - Static method in class services.publix.PublixErrorMessages
 
couldntGeneratePathToFileOrDir(String) - Static method in class general.common.MessagesStrings
 
count() - Method in class daos.common.ComponentResultDao
 
count() - Method in class daos.common.StudyDao
Returns the number of Study rows
count() - Method in class daos.common.StudyResultDao
Returns the number of StudyResult rows
count() - Method in class daos.common.UserDao
Returns the number of User rows
count() - Method in class daos.common.worker.WorkerDao
Returns the number of Worker rows
countAll() - Method in class daos.common.StudyLinkDao
 
countByBatch(Batch) - Method in class daos.common.GroupResultDao
 
countByBatch(Batch, String) - Method in class daos.common.StudyResultDao
Returns the number of StudyResults belonging to the given batch but excludes results from the given workerTypeToBeExcluded.
countByBatchAndWorkerType(Batch, String) - Method in class daos.common.StudyLinkDao
 
countByBatchAndWorkerType(Batch, String) - Method in class daos.common.StudyResultDao
Returns the number of StudyResults belonging to the given batch and given worker type.
countByComponent(Component) - Method in class daos.common.ComponentResultDao
Returns the number of ComponentResults belonging to the given Component.
countByGroup(GroupResult) - Method in class daos.common.StudyResultDao
Returns the number of StudyResults belonging to the given group.
countByStudy(Study) - Method in class daos.common.StudyResultDao
Returns the number of StudyResults belonging to the given study.
countByWorker(Worker, User) - Method in class daos.common.StudyResultDao
Returns the number of StudyResults belonging to the given worker.
countComponentResultsForStudyResultIds(List<Long>) - Method in class daos.common.StudyResultDao
 
countLoginAttemptsOfLastMin(String) - Method in class daos.common.LoginAttemptDao
Returns the count of LoginAttempts that happened within the last minute for the given username
countTotal() - Method in class daos.common.StudyDao
Returns the total number of Studys (including the deleted ones)
countTotal() - Method in class daos.common.StudyResultDao
Returns the total number of StudyResults (including the deleted ones)
countTotal() - Method in class daos.common.worker.WorkerDao
Returns the total number of Worker (including the deleted ones)
create(Http.Request) - Method in class controllers.gui.Users
Handles POST request of user create form.
create(ApiToken) - Method in class daos.common.ApiTokenDao
 
create(Batch) - Method in class daos.common.BatchDao
 
create(Component) - Method in class daos.common.ComponentDao
 
create(ComponentResult) - Method in class daos.common.ComponentResultDao
 
create(GroupResult) - Method in class daos.common.GroupResultDao
 
create(LoginAttempt) - Method in class daos.common.LoginAttemptDao
 
create(Study) - Method in class daos.common.StudyDao
 
create(StudyLink) - Method in class daos.common.StudyLinkDao
 
create(StudyResult) - Method in class daos.common.StudyResultDao
 
create(User) - Method in class daos.common.UserDao
Persist user (involves creating a JatosWorker)
create(String, boolean) - Method in class daos.common.worker.MTWorkerDao
Create MTWorker.
create(Worker) - Method in class daos.common.worker.WorkerDao
 
create(Study) - Method in class general.common.StudyLogger
 
create(User, String, Integer) - Method in class services.gui.ApiTokenService
Generates a new api token and persists it in the database.
createAndPersistBatch(Batch, Study, User) - Method in class services.gui.BatchService
Creates batch, initialises it and persists it.
createAndPersistComponent(Study, Component) - Method in class services.gui.ComponentService
Initialise and persist the given Component.
createAndPersistComponent(Study, ComponentProperties) - Method in class services.gui.ComponentService
Create and persist a Component with given properties.
createAndPersistGeneralMultipleWorker(Batch) - Method in class services.publix.WorkerCreator
Create and persist a GeneralMultipleWorker
createAndPersistGeneralSingleWorker(Batch) - Method in class services.publix.WorkerCreator
Create and persist a GeneralSingleWorker
createAndPersistMTWorker(String, boolean, Batch) - Method in class services.publix.WorkerCreator
Creates and persists a MTWorker or a MTSandboxWorker.
createAndPersistStudy(User, StudyProperties) - Method in class services.gui.StudyService
Create and persist a Study with given properties.
createAndPersistStudy(User, Study) - Method in class services.gui.StudyService
Persists the given Study.
createAndPersistStudyLinks(String, int, Batch, String) - Method in class services.gui.StudyLinkService
 
createAndPersistUser(User, String, boolean, User.AuthMethod) - Method in class services.gui.UserService
Creates a user, sets password hash and persists them.
createComponentResult(StudyResult, Component) - Method in class services.publix.ResultCreator
 
createDefaultBatch(Study) - Method in class services.gui.BatchService
Create and initialises default Batch.
createDir(File) - Static method in class utils.common.IOUtils
Creates the given File as a directory, including necessary and non-existent parent directories.
createStudyAssetsDir(String) - Method in class utils.common.IOUtils
Creates a study assets dir.
createStudyExportZipFile(Study) - Method in class services.gui.ImportExportService
Returns a JATOS study archive (suffix .jzip).
createStudyResult(StudyLink, Worker) - Method in class services.publix.ResultCreator
Creates StudyResult and adds it to the given Worker.
creation - Variable in class utils.common.DirectoryStructureToJson.Node
 
CREATION_TIME - Static variable in class services.publix.idcookie.IdCookieModel
 
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